Wednesday, 10 February 2016

mtDNA Haplogroups M and N stated as Native American!!!


An “In Press Corrected Proof” of a paper by Cosimo Posth et. al (1), released last week had an enormously shocking (to me at least!) statement in its summary.

Here is that summary with the true shocker in bold - the emphasis is of course mine.

“Summary
How modern humans dispersed into Eurasia and Australasia, including the number of separate expansions and their timings, is highly debated [ 1, 2 ]. Two categories of models are proposed for the dispersal of non-Africans: (1) single dispersal, i.e., a single major diffusion of modern humans across Eurasia and Australasia [ 3–5 ]; and (2) multiple dispersal, i.e., additional earlier population expansions that may have contributed to the genetic diversity of some present-day humans outside of Africa [ 6–9 ]. Many variants of these models focus largely on Asia and Australasia, neglecting human dispersal into Europe, thus explaining only a subset of the entire colonization process outside of Africa [ 3–5, 8, 9 ]. The genetic diversity of the first modern humans who spread into Europe during the Late Pleistocene and the impact of subsequent climatic events on their demography are largely unknown. Here we analyze 55 complete human mitochondrial genomes (mtDNAs) of hunter-gatherers spanning 35,000 years of European prehistory. We unexpectedly find mtDNA lineage M in individuals prior to the Last Glacial Maximum (LGM). This lineage is absent in contemporary Europeans, although it is found at high frequency in modern Asians, Australasians, and Native Americans. Dating the most recent common ancestor of each of the modern non-African mtDNA clades reveals their single, late, and rapid dispersal less than 55,000 years ago. Demographic modeling not only indicates an LGM genetic bottleneck, but also provides surprising evidence of a major population turnover in Europe around 14,500 years ago during the Late Glacial, a period of climatic instability at the end of the Pleistocene.”

But it doesn’t end there.. oh no! Or should I rather shout yes, yes, YES!

From the Results and Discussion section we also have:

“However, whereas present-day Asians, Australasians, and Native Americans carry both M and N mtDNA hgs.”
 
Now I haven’t had time to fully digest the paper yet, but I am fairly certain that I have read this correctly and am not going out of my mind.

As most bloggers interested in the peopling of the Americas will know, the accepted mtDNA haplogroups found in the pre-Colombian population have been limited to A, B, C, D and X and one case of mtDNA M in a mid-Holocene burial from China Lake, British Columbia (Malhi et. al. 2007 (2)), so this would be BIG news.

I’ll update this post when I have closely read every sentence of the paper and supporting materials.

Let’s hope it’s not me going off my trolley or the authors making a huge error!

Below is lovely phylogenic-tree from the paper for your delectation:



Update 24th of February

Apologies for nearly for wetting myself with excitement over the wording of Posth et. als  paper.

Let me explain, after reading it several times I had doubts that it meant what I thought it meant: Haplogroups M and N are found in America.. I thought I had missed some major paper.

However just to check I posted on several genetics forums that had discussions on the paper. The replies I had were polite and explained what I had suspected Posth et al meant the lineages descended from haplogroups M and N i.e. the A, B, C, D and X of Native Americans.

Here are some of my postings and the thoughtful replies:

Here's the one from the Molecular Ecologist

Here's the one from Dienekes:

For a totally hilarious exchange see here! All I can say regarding this one is that it just goes to prove that the arrogant, opinionated and unreasonable of the 'real' world are found in fairly rarefied world of genetics discussion boards.. Go on click.. it really REALLY is worth a read.
 

References
1. Posth, C. 2016. Pleistocene Mitochondrial Genomes Suggest a Single Major Dispersal of Non-Africans and a Late Glacial Population Turnover in Europe.
In Press Corrected Proof Current Biology. Retrieved from:
http://www.cell.com/current-biology/fulltext/S0960-9822(16)00087-7

 2. Malhi, R. S. et. al. 2007. Mitochondrial haplogroup M discovered in prehistoric
North Americans. Journal of Archaeological Science 34 (2007) 642-648
Pdf download at:

2 comments:

  1. For a totally hilarious exchange see here! All I can say regarding this one is that it just goes to prove that the arrogant, opinionated and unreasonable of the 'real' world are found in fairly rarefied world of genetics discussion boards.. Go on click.. it really REALLY is worth a read.

    All I can say regarding that exchange is what a fool you are to equate me to mooreisbetter and to some other person with the name Onur.

    ReplyDelete
    Replies
    1. Dear 'Onur', thank you for your, as usual, well-thought-out response. NeilB

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